pfgsea 0.0.1 (2018-11-26)

Initial release.

pfgsea 0.0.2 (2018-12-14)

Major changes

  • Switched to using goalie for assert checks instead of assertive.

Minor changes

  • Added README.
  • Set up lintr checks.
  • Set up pkgdown website.
  • Miscellaneous documentation improvements.

pfgsea 0.0.3 (2018-12-17)

New functions

  • statsList: Return preranked GSEA stats list.

Major changes

  • Added FGSEA R Markdown template.

pfgsea 0.0.4 (2019-01-15)

Minor changes

  • Documentation fixes and other code cleanup to pass lintr checks.

pfgsea 0.0.5 (2019-02-04)

Major changes

  • Now exporting FGSEAList and RankedList S4 classes.
  • Reworked plotEnrichment(), plotGSEATable(), and topTables() to use FGSEAList object.
  • Renamed statsList() to RankedList(), and switched to S4 method approach.
  • Updated R Markdown template to reflect these function reworkings.

pfgsea 0.0.6 (2019-03-11)

Minor changes

  • Improved parameterized object passthrough in R Markdown template.
  • Added Travis CI and AppVeyor CI coverage.

pfgsea 0.0.7 (2019-03-18)

Minor changes

  • Updated basejump and DESeqAnalysis dependencies.